MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus danieliae
STR.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 1,967,238 bps
CDS: 1,829
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 72
misc RNA:
Total features: 1,909
Total number of protein coding genes annotated/found:
1,829
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5003|JADGKG010000085.1
SEQF5003_00216
Genome Viewer
NA
AA
1218/406
1-1218
hypothetical protein
SEQF5003|JADGKG010000125.1
SEQF5003_00986
Genome Viewer
NA
AA
693/231
3-695
IS256 family transposase ISSag11
SEQF5003|JADGKG010000221.1
SEQF5003_00386
Genome Viewer
NA
AA
786/262
7-792
C protein alpha-antigen
SEQF5003|JADGKG010000192.1
SEQF5003_00568
Genome Viewer
NA
AA
234/78
8-241
O-acetyltransferase OatA
SEQF5003|JADGKG010000236.1
SEQF5003_00330
Genome Viewer
NA
AA
393/131
12-404
IS66 family transposase ISEbi1
SEQF5003|JADGKG010000070.1
SEQF5003_00075
Genome Viewer
NA
AA
495/165
20-514
hypothetical protein
SEQF5003|JADGKG010000062.1
SEQF5003_01784
Genome Viewer
NA
AA
567/189
25-591
ISL3 family transposase ISSth1
SEQF5003|JADGKG010000057.1
SEQF5003_00159
Genome Viewer
NA
AA
603/201
32-634
putative HTH-type transcriptional regulator YbbH
SEQF5003|JADGKG010000080.1
SEQF5003_00378
Genome Viewer
NA
AA
507/169
41-547
IS630 family transposase ISStso1
SEQF5003|JADGKG010000230.1
SEQF5003_00438
Genome Viewer
NA
AA
321/107
44-364
hypothetical protein
SEQF5003|JADGKG010000242.1
SEQF5003_00293
Genome Viewer
NA
AA
873/291
49-921
hypothetical protein
SEQF5003|JADGKG010000203.1
SEQF5003_00295
Genome Viewer
NA
AA
1440/480
49-1488
HMP-PP phosphatase
SEQF5003|JADGKG010000220.1
SEQF5003_00383
Genome Viewer
NA
AA
873/291
49-921
hypothetical protein
SEQF5003|JADGKG010000083.1
SEQF5003_00542
Genome Viewer
NA
AA
384/128
49-432
hypothetical protein
SEQF5003|JADGKG010000155.1
SEQF5003_01278
Genome Viewer
NA
AA
453/151
49-501
hypothetical protein
SEQF5003|JADGKG010000027.1
SEQF5003_00297
Genome Viewer
NA
AA
1374/458
50-1423
IS1634 family transposase ISSeq4
SEQF5003|JADGKG010000262.1
SEQF5003_01321
Genome Viewer
NA
AA
960/320
59-1018
L-asparaginase 2
SEQF5003|JADGKG010000156.1
SEQF5003_00035
Genome Viewer
NA
AA
315/105
61-375
hypothetical protein
SEQF5003|JADGKG010000149.1
SEQF5003_01059
Genome Viewer
NA
AA
315/105
61-375
hypothetical protein
SEQF5003|JADGKG010000250.1
SEQF5003_00541
Genome Viewer
NA
AA
237/79
81-317
hypothetical protein
Items 1 - 20
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Genome Viewer
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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